{
    "exit_code": null,
    "summary": {
        "num_errors": 1,
        "num_failures": 0,
        "num_skips": 0,
        "num_tests": 1
    },
    "tests": [
        {
            "data": {
                "end_datetime": "2026-09-17T11:47:30.379012",
                "execution_problem": "'rows'",
                "inputs": {
                    "gene_query_panel": {
                        "class": "Collection",
                        "collection_type": "sample_sheet",
                        "elements": [
                            {
                                "class": "File",
                                "filetype": "fasta",
                                "identifier": "E",
                                "location": "https://raw.githubusercontent.com/galaxyproject/tools-iuc/main/tools/kmindex/test-data/query1.fasta"
                            },
                            {
                                "class": "File",
                                "filetype": "fasta",
                                "identifier": "J",
                                "location": "https://raw.githubusercontent.com/galaxyproject/tools-iuc/main/tools/lexicmap/test-data/lexicmap_query3.fasta"
                            }
                        ]
                    },
                    "kmindex_db_selection": "register",
                    "kmindex_fast": false,
                    "kmindex_output_format": "json",
                    "kmindex_threshold": 0.3,
                    "kmindex_zvalue": 6,
                    "lexicmap_advanced_all": true,
                    "lexicmap_index_selection": "db,db2",
                    "lexicmap_top_n_genomes": 0,
                    "tiling_qc_allow_frameshifts": false,
                    "tiling_qc_max_internal_stops": 0,
                    "tiling_qc_min_coverage": 0.8,
                    "tiling_qc_min_coverage_partial": 0.5,
                    "tiling_qc_min_pident": 60.0,
                    "tiling_qc_sample_cap": 10
                },
                "invocation_details": null,
                "job": null,
                "output_problems": [],
                "problem_log": null,
                "start_datetime": "2026-09-17T11:47:15.607411",
                "status": "error"
            },
            "doc": "kmindex_wiring_smoke_generic_fixtures: structural/wiring smoke test for the kmindex containment-screen chain and lexicmap_search's multi-index-selection binding, using each pinned Tool Shed wrapper's own real upstream functional-test fixtures (generic, non-phiX174 sequences and indices). Proves the workflow's collection map-over, multi-select DB/index binding, and per-gene sensitivity-override wiring execute without error. Does NOT audit any biological content, including the Gene E am3 diagnostic (see the other test case for that).",
            "has_data": true,
            "id": "galaxy-workflow.gxwf.yml_0",
            "test_type": "galaxy_workflow"
        }
    ],
    "version": "0.1"
}